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Welcome to the Approaching the Hard-to-Diagnose course—a comprehensive and case-driven program designed for clinicians, medical geneticists, and healthcare professionals ready to go beyond the basics of genetic testing. If you've ever faced uncertainty when interpreting complex genetic findings or wondered how to make sense of a VUS result, this course is for you.

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Welcome to the Approaching the Hard-to-Diagnose course—a comprehensive and case-driven program designed for clinicians, medical geneticists, and healthcare professionals ready to go beyond the basics of genetic testing. If you've ever faced uncertainty when interpreting complex genetic findings or wondered how to make sense of a VUS result, this course is for you.

We know the world of rare disease diagnosis is often filled with uncertainty. Tests come back inconclusive, and traditional methods sometimes miss what really matters. That’s why this course focuses on real-life clinical complexities that arise even after the initial sequencing is done.

In this course, you’ll explore:

  • When to choose exome vs. genome sequencing, and how to recognize their unique strengths and limitations.

  • Interpretation of deep intronic variants, CNVs, and SVs using advanced tools like SpliceAI and integrated databases.

  • How to evaluate and follow up on VUS (Variants of Uncertain Significance) with practical frameworks and ongoing care strategies.

  • Reanalysis techniques and the role of novel gene discovery, particularly in unsolved rare disease cases.

  • Emerging technologies such as long-read sequencing (LRS) and RNA-seq, and how they are transforming the field of clinical genomics.

Every session is structured around clinical case examples, designed to mirror real-world diagnostic dilemmas you’ll encounter in practice. You won’t just learn about rare disease genomics—you’ll learn how to apply that knowledge, critically think through complex results, and participate more actively in your multidisciplinary care team.

Whether you’re in pediatrics, neurology, internal medicine, or genetics, this course will sharpen your diagnostic thinking and empower you to make more confident decisions when ordering, interpreting, and following up on advanced genetic tests.

Join us, and take one step closer to delivering precision care for patients with rare and undiagnosed conditions.

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What's inside

Learning objectives

  • Understand how to choose between exome and genome testing based on clinical context and limitations.
  • Interpret complex variants such as deep intronic mutations, cnvs, and structural variants using advanced tools.
  • Evaluate and manage vus (variants of uncertain significance) with real-life decision-making strategies.
  • Apply strategies for reanalysis and novel gene discovery in unresolved cases.
  • Gain foundational knowledge of long-read sequencing and rna sequencing technologies.
  • Review advanced case examples that integrate complex variant interpretation and diagnostic strategy.
  • Build clinical confidence in tackling unsolved rare disease cases using cutting-edge genomic approaches.

Syllabus

Introduction
Course Introduction
Utility and Limitations of Exome and Genome Sequencing
Understanding limitation of Next Generation Sequencing (NGS)
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Learners who complete Approaching the Hard-to-Diagnose will develop knowledge and skills that may be useful to these careers:

Reading list

We've selected 21 books that we think will supplement your learning. Use these to develop background knowledge, enrich your coursework, and gain a deeper understanding of the topics covered in Approaching the Hard-to-Diagnose.
This esteemed text offers a comprehensive exploration of medical genetics, encompassing the fundamental principles and their clinical applications, including the interpretation and utilization of genetic testing results for the diagnosis and management of genetic disorders.
This comprehensive book explores the translation and implementation of genomic information into healthcare. It covers the foundations of genomic medicine and its practical applications, including those derived from genome sequencing. It valuable resource for those interested in the clinical impact of genomics.
Is directly relevant to genome sequencing as it covers the computational methods used to analyze sequence and genome data. It is an excellent resource for understanding the bioinformatics side of genome sequencing. It serves as both a textbook and a reference for students and professionals.
Provides a direct and comprehensive overview of genomes, their structure, and analysis. It is highly relevant to the topic of genome sequencing and covers various aspects of genomics. It good resource for gaining a broad understanding.
A comprehensive guide to RNA sequencing methods and protocols, covering library preparation, sequencing, data analysis, and interpretation.
Providing a practical guide to genetic counseling, this book delves into the ethical, legal, and social implications of genetic testing, empowering readers to effectively communicate and support individuals and families navigating genetic testing decisions.
Focusing specifically on human genetics, this book delves into the molecular aspects of human genes and genomes. It is highly relevant for understanding the application of genome sequencing in human health and disease. valuable reference and is used in advanced undergraduate and graduate courses.
Focuses on the applications of genomics, including genome sequencing, in human biology and medicine. It is highly relevant for understanding the practical uses of genome sequencing technology. It valuable resource for students and professionals in related fields.
Covers the principles behind genome analysis and the broader field of genomics. It provides a solid foundation for understanding the methodologies and applications related to genome sequencing. It is suitable for advanced undergraduates and graduate students.
Specifically addresses the computational techniques used in genome analysis. It good resource for those interested in the algorithms and statistical methods behind genome sequencing data analysis. It is suitable for advanced undergraduate and graduate students with a computational background.
Offers a comprehensive introduction to genetics, bridging Mendelian genetics with molecular discoveries. It provides a solid understanding of genes and genomes, which is directly relevant to genome sequencing. It is often used as a textbook in introductory genetics courses.
A classic and comprehensive textbook in molecular biology and genetics, Lewin's Genes provides in-depth coverage of gene structure, function, and regulation. While not solely focused on sequencing, it offers essential background knowledge for a deep understanding of the subject. It widely recognized reference in the field.
Provides a broad introduction to bioinformatics and its application in functional genomics, which is closely related to understanding the output of genome sequencing. It widely used textbook in bioinformatics programs.
Foundational text in bioinformatics, covering the probabilistic models used to analyze biological sequences. While not exclusively about genomes, the techniques described are fundamental to genome sequencing data analysis. It classic reference for graduate students and researchers.
This foundational text in cell and molecular biology, providing essential prerequisite knowledge for understanding genome sequencing. It covers the fundamental principles of DNA structure, function, and gene expression, which are critical for grasping the concepts in genome sequencing. It is widely used as a textbook in undergraduate and graduate programs.
Explores the intersection of genomics and personalized medicine, highlighting the impact of genetic testing on tailored healthcare approaches and disease prevention strategies.
This popular science book offers a compelling and accessible journey through the human genome, dedicating each chapter to a chromosome. While not a technical textbook, it provides a broad understanding of the history, evolution, and implications of our genes, making the topic engaging for a wider audience, including high school students and those new to the field.
A classic text in molecular biology, this book provides fundamental knowledge about genes and their functions. While earlier editions predate widespread genome sequencing, it offers essential historical context and foundational principles that are still relevant. It is valuable for understanding the origins of the field.
A comprehensive guide to next-generation sequencing methods and applications, including RNA sequencing.

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