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Giuliano M. Dragone

Bioprocesses make use of microorganisms, animal cells, or enzymes to manufacture new products or complete a chemical transformation. Since ancient days, humans have been using microorganisms to transform biological materials for the production of alcoholic beverages and other fermented foods. Since then, bioprocesses have been developed for an enormous range of commercial products, from relatively cheap products such as organic solvents and industrial alcohol, to expensive specialty chemicals such as therapeutic proteins, antibiotics, and vaccines. Nowadays, the development of bioprocesses is an essential part of a large number of chemical, food, and pharmaceutical industries.

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Bioprocesses make use of microorganisms, animal cells, or enzymes to manufacture new products or complete a chemical transformation. Since ancient days, humans have been using microorganisms to transform biological materials for the production of alcoholic beverages and other fermented foods. Since then, bioprocesses have been developed for an enormous range of commercial products, from relatively cheap products such as organic solvents and industrial alcohol, to expensive specialty chemicals such as therapeutic proteins, antibiotics, and vaccines. Nowadays, the development of bioprocesses is an essential part of a large number of chemical, food, and pharmaceutical industries.

The main purpose of the course “Introduction to Industrial Bioprocess Development” is to provide an overview of the common stages involved in this type of processes.

The course is primarily aimed at students, researchers, and professionals with an interest in bioprocessing, biomanufacturing, or fermentation technology. Some knowledge of biology, biotechnology and/or biochemical engineering will be advantageous, but not mandatory.

The course begins with a brief description of some basic properties of microorganisms and general aspects related to their use in bioprocesses at industrial scale. Following this, the kinetic bases for cell growth, substrate utilization and product formation during batch, continuous and fed-batch cultures are discussed. In addition, the course includes a group of lectures dedicated to some stages that precede fermentation; specifically, media formulation, sterilization, preservation of microorganisms and inoculum preparation. The main characteristics of predominant types of industrial bioreactors along with process parameters that need to be controlled in stirred tank reactors are also covered in one of the modules of the course. Since the expansion of a bioprocess from a lab scale to an industrial scale is of considerable importance, an additional lecture dedicated to this topic is presented. The last part of the course provides a general overview of downstream processing, addressing processes used for the removal of cells from the culture medium, methods for the disruption of cells, and isolation of the target bioproduct.

By the end of the course, you should:

# Be able to identify the fundamental difference between the two basic cell types: eukaryotic and prokaryotic cells

# Distinguish the main steps of the brewing process

# Identify some important steps in recombinant protein production

# Define the different stages of the industrial production of bioethanol

# Distinguish the main characteristics of the three fermentation modes: batch, continuous and fed-batch

# Define important parameters of the continuous fermentation mode

# Identify bioprocesses where fed-batch fermenters are used and for how long can a fed-batch process be run

# Identify how defined and undefined fermentation media are formulated

# Discuss the role that key components of culture media play in bioconversion processes

# Recognize the importance in avoiding microbial contamination

# Describe chemical and physical sterilization methods

# Distinguish the main characteristics of common techniques of cell preservation

# Recognize factors that are commonly considered to obtain an inoculum suitable for fermentation at industrial scale

# Define what a bioreactor is and in which industrial bioprocesses are commonly used

# Identify the main parameters that need to be controlled during microbial conversions in STRs

# List relevant parameters that are considered for scale-up purposes

# Define the sequential steps of downstream processing

# Distinguish different methods for biomass removal or cell harvesting

# Select common unit operations used for primary isolation

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Syllabus

Module 1 - Fundamentals of Microbial Bioreaction Design
In Module 1 you will find an introduction to some properties of microorganisms. Microorganisms are essential for the development of industrial bioprocesses. You will learn how they are used in fermentation processes for conversion of sugars into ethanol, e.g., for beer or vinegar production. Major discoveries during the 19th and 20th centuries that led to the bioproduction of antibiotics and chemicals on an industrial scale are also covered in this Module. A discussion on the use of recombinant proteins, metabolic engineering and commercial production of bioethanol is presented in the last part of the Module.
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Module 2 - Mass Balances and Kinetics
Industrial fermentation processes are largely classified as batch, fed-batch or continuous operations. In Module 2 you will learn the main characteristics of these three operation modes. This Module also covers the advantages and disadvantages of each type of bioreactor operation.
Module 3 - Upstream Processing
In Module 3, you will learn about the different sources and roles of individual components of fermentation media. A well-designed fermentation medium is critical to the ultimate success of industrial bioprocesses at industrial scale. Students will be also introduced to the most common sterilization methods used in biomanufacturing processes at lab and industrial scale. In addition, we will be looking at different preservation techniques of microbial cultures. The Module will end up describing some requirements needed for the preparation of an inoculum to be used in the production stage.
Module 4 - Bioreactor Engineering
In this Module we will look at the different types of bioreactors that are commonly used for biomanufacturing processes at industrial scale. Module 4 also covers the main processes parameters that affect the development of a bioprocess in Stirred Tank Reactors (STRs). We will also explore the most common strategies to scale up a bioprocess in order to reach the production-scale level in the most efficient and economical manner.
Module 5 - Downstream Processing
Module 5 will cover the main stages of downstream processing of bioproducts. Along with the review of common operations used for primary isolation, this Module will present detailed case studies showcasing the complexity required to obtain both extracellular (lactic acid) and intracellular (enzymes) products.

Good to know

Know what's good
, what to watch for
, and possible dealbreakers
Explores the applications and scales of industrial bioprocesses used in various industries
Delves into mass balances and kinetics, including batch, continuous, and fed-batch modes, preparing students for industrial fermentation processes
Teaches students how to formulate and sterilize media, preserve microorganisms, and prepare inoculum, providing a comprehensive overview of upstream processing
Covers Stirred Tank Reactor (STR) fundamentals, control parameters, and scale-up considerations, equipping students with essential knowledge for industrial bioreactor design
Provides insights into downstream processing, including biomass removal, isolation methods, and case studies, offering a thorough understanding of bioproduct recovery
Requires prior knowledge of biology, biotechnology, and/or biochemical engineering, which may be a barrier for students without these backgrounds

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Activities

Be better prepared before your course. Deepen your understanding during and after it. Supplement your coursework and achieve mastery of the topics covered in Introduction to Industrial Bioprocess Development with these activities:
Compile a list of resources on bioprocessing
Compiling a list of resources on bioprocessing will help you stay up-to-date on the latest developments in the field.
Show steps
  • Search for resources on bioprocessing online and in libraries.
  • Create a list of the most relevant and useful resources.
  • Organize the list by topic or type of resource.
Review molecular biology concepts
Reviewing molecular biology concepts will help you understand the fundamentals of bioprocessing.
Browse courses on Molecular Biology
Show steps
  • Read textbooks and articles on molecular biology.
  • Attend review sessions or workshops on molecular biology.
  • Take practice quizzes or exams on molecular biology.
Brush up on your microbiology skills
Brushing up on your microbiology skills will help you understand the role of microorganisms in bioprocessing.
Browse courses on Microbiology
Show steps
  • Review your microbiology notes or textbooks.
  • Take practice quizzes or exams on microbiology.
  • Attend a microbiology workshop or seminar.
Six other activities
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Show all nine activities
Read 'Bioprocess Engineering: Principles, Modeling, and Design'
This book provides a comprehensive overview of bioprocess engineering principles and applications.
Show steps
  • Read the book thoroughly.
  • Take notes and highlight important concepts.
  • Complete the practice problems at the end of each chapter.
Solve bioprocess engineering problems
Solving bioprocess engineering problems will help you develop your problem-solving skills and apply your knowledge to practical scenarios.
Show steps
  • Find bioprocess engineering problems online or in textbooks.
  • Attempt to solve the problems on your own.
  • Check your solutions against the provided answer key or ask for help from a tutor or instructor.
  • Review your mistakes and identify areas where you need improvement.
Follow video tutorials on bioprocess design
Following video tutorials on bioprocess design will provide you with visual demonstrations and practical insights into the design process.
Show steps
  • Search for video tutorials on bioprocess design online.
  • Watch the tutorials carefully and take notes.
  • Try to apply the concepts you learn to your own bioprocess design projects.
Design a bioprocess for a specific product
Designing a bioprocess for a specific product will allow you to apply your knowledge and skills to a real-world scenario.
Show steps
  • Identify the product you want to produce.
  • Research the different bioprocesses that can be used to produce the product.
  • Design a bioprocess that meets your specific requirements.
  • Write a report that describes your design.
Mentor other students in bioprocessing
Mentoring other students in bioprocessing will help you solidify your own understanding of the subject.
Show steps
  • Identify students who need help with bioprocessing.
  • Offer your help and schedule regular meetings.
  • Provide guidance and support on bioprocess engineering concepts and techniques.
Contribute to open-source bioprocessing projects
Contributing to open-source bioprocessing projects will allow you to learn from and collaborate with others in the field.
Show steps
  • Identify open-source bioprocessing projects that align with your interests.
  • Join the project community and introduce yourself.
  • Find a task that you can contribute to and start working on it.

Career center

Learners who complete Introduction to Industrial Bioprocess Development will develop knowledge and skills that may be useful to these careers:
Biomanufacturing Scientist
Biomanufacturing Scientists develop and optimize processes for the large-scale production of biological products, such as vaccines, antibodies, and enzymes. This course provides a comprehensive overview of the principles and practices of biomanufacturing, including topics such as cell culture, fermentation, and downstream processing. It is an essential resource for anyone who wants to pursue a career in this rapidly growing field.
Fermentation Scientist
Fermentation Scientists research and develop fermentation processes for the production of a wide range of products, including pharmaceuticals, food, and biofuels. This course provides a strong foundation for a career in Fermentation Science, covering topics such as microbial physiology, fermentation kinetics, and bioreactor design.
Bioprocess Engineer
Bioprocess Engineers apply engineering principles to design and develop industrial bioprocesses. They work to maximize the efficiency and productivity of these processes, which are used to produce a wide variety of products, including pharmaceuticals, food, and biofuels. This course provides a strong foundation for a career in Bioprocess Engineering, covering topics such as microbial growth kinetics, bioreactor design, and downstream processing.
Bioprocess Technician
Bioprocess Technicians operate and maintain industrial bioprocesses. They work under the supervision of Bioprocess Engineers and Biomanufacturing Scientists to ensure that processes are running smoothly and efficiently. This course provides the essential knowledge and skills needed to succeed in this role, covering topics such as fermentation, bioreactor operation, and downstream processing.
Biomanufacturing Operator
Biomanufacturing Operators work in cleanrooms and other controlled environments to produce biological products. They are responsible for operating and maintaining equipment, monitoring processes, and ensuring that products meet quality standards. This course provides the essential knowledge and skills needed to succeed in this role, covering topics such as cell culture, fermentation, and downstream processing.
Regulatory Affairs Specialist
Regulatory Affairs Specialists ensure that biological products comply with government regulations. They work with regulatory agencies to obtain approvals for new products and to ensure that products are manufactured and marketed in accordance with the law. This course provides the essential knowledge and skills needed to succeed in this role, covering topics such as regulatory affairs, quality assurance, and compliance.
Quality Control Analyst
Quality Control Analysts ensure that biological products meet safety and quality standards. They work in laboratories to test products for contaminants, potency, and other factors. This course provides the essential knowledge and skills needed to succeed in this role, covering topics such as microbiology, analytical chemistry, and quality control procedures.
Project Manager
Project Managers plan and execute projects to develop and launch new biological products. They work with cross-functional teams to ensure that projects are completed on time, within budget, and to the required quality standards. This course provides the essential knowledge and skills needed to succeed in this role, covering topics such as project management, risk management, and stakeholder management.
Business Development Manager
Business Development Managers identify and develop new business opportunities for biological products. They work with customers and partners to create new markets and to develop new products and services. This course provides the essential knowledge and skills needed to succeed in this role, covering topics such as business development, strategic planning, and market research.
Sales and Marketing Specialist
Sales and Marketing Specialists promote and sell biological products to customers. They work with customers to identify their needs and to develop solutions that meet their requirements. This course provides the essential knowledge and skills needed to succeed in this role, covering topics such as sales techniques, marketing principles, and product knowledge.
Patent Attorney
Patent Attorneys help inventors to obtain and protect patents for their inventions. They work with inventors to draft patent applications and to prosecute them through the patent office. This course may be useful for those who wish to pursue a career in Patent Law, as it provides a strong foundation in the principles and practices of bioprocessing.
Science Writer
Science Writers communicate complex scientific information to a non-technical audience. They work for a variety of organizations, including universities, research institutions, and publishing companies. This course may be useful for those who wish to pursue a career in Science Writing, as it provides a strong foundation in the principles and practices of bioprocessing.
Policy Analyst
Policy Analysts research and analyze public policy issues. They work for a variety of organizations, including government agencies, think tanks, and advocacy groups. This course may be useful for those who wish to pursue a career in Policy Analysis, as it provides a strong foundation in the principles and practices of bioprocessing.
Consultant
Consultants provide advice and expertise to businesses and organizations. They work on a variety of projects, including business strategy, market research, and technology implementation. This course may be useful for those who wish to pursue a career in Consulting, as it provides a strong foundation in the principles and practices of bioprocessing.
Research Scientist
Research Scientists conduct research to develop new biological products and technologies. They work in laboratories to investigate new scientific concepts and to develop new methods for producing and using biological products. This course may be useful for those who wish to pursue a career in Research Science, as it provides a strong foundation in the principles and practices of bioprocessing.

Reading list

We've selected seven books that we think will supplement your learning. Use these to develop background knowledge, enrich your coursework, and gain a deeper understanding of the topics covered in Introduction to Industrial Bioprocess Development.
This textbook provides a comprehensive overview of metabolic engineering, covering topics such as metabolic pathways, gene regulation, and strain improvement. It is useful as a textbook for students and as a reference for researchers and industry professionals.
This textbook provides a comprehensive overview of bioprocess technology, covering topics such as cell culture, fermentation, and bioproduct recovery. It is useful as a textbook for students and as a reference for researchers and industry professionals.
This encyclopedia provides a comprehensive overview of industrial biotechnology, covering topics such as cell culture, fermentation, and bioproduct recovery. It is useful as a reference for researchers and industry professionals.
This classic textbook provides a comprehensive overview of biochemical engineering, covering topics such as cell biology, enzyme kinetics, and fermentation. It is useful as a textbook for students and as a reference for researchers and industry professionals.
This textbook provides a comprehensive overview of industrial bioprocess development, covering topics such as cell culture, fermentation, and bioproduct recovery. It is useful as a reference for students, researchers, and industry professionals.
This textbook provides a foundational understanding of bioprocess engineering, covering topics such as mass balances, kinetics, and reactor design. It is useful as a textbook for students and as a reference for researchers and industry professionals.
This textbook provides a comprehensive overview of biotechnology, covering topics such as cell biology, molecular biology, and genetic engineering. It is useful as a textbook for students and as a reference for researchers and industry professionals.

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