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Industrial Fermentation

Henk Noorman, Adrie Straathof, Cees Haringa, John Posada Duque, Ludovic Jourdin, Patricia Osseweijer, and Wouter van Winden

Industrial fermentation is the central operation in a broad, sustainable value chain, also involving the upstream generation and supply of renewable feedstocks, and downstream purification of the products formed.

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Industrial fermentation is the central operation in a broad, sustainable value chain, also involving the upstream generation and supply of renewable feedstocks, and downstream purification of the products formed.

In this course you will understand how the essential process inputs and outputs are connected via biological and physical mechanisms, and form the basis of process design, scrutiny, optimization and scaling between factory and lab.

This course provides the insights and tools for designing industrial fermentation processes with sustainability advantages, where choices of product and feedstock determine the specific process requirements. Six experienced course leaders will reveal the essentials of industrial fermentation and how to apply these for conceptual design and quantification, resulting in basic mathematical frames and models. Throughout the course, you will apply the theory to a case study where you will produce the building block 1,3-propane diol (PDO) from sugar. Also, you will experience what are the main pitfalls (‘banana skins’) and how to stay away from them.

The course includes guest lectures from industry and universities.

This course is geared towards Biologists, Biotechnologists and Chemical and Environmental Engineers, but will also be of value to others with a different science and engineering background or interest, working in the field of research, development and manufacturing, who wish to deepen their knowledge of industrially relevant fermentation technology and operations.

What's inside

Learning objectives

  • Apply the insights to suggest improvements for industrial fermentation processes and design of down-scaled lab-scale simulators
  • After this course all learners will be in a position to:
  • Describe the essence of industrial fermentation
  • Utilize insights gained to design an industrial scale quantitative fermentation plant
  • Explain the causes and remedies for scale-up issues, from lab to factory

Syllabus

Getting started and introduction is included in Week 1
Unit 1. Industrial Fermentation
Industrial Fermentation: the Great Adventure?
Industrial Fermentation Essentials (preliminary title)
Read more
Benefits for society and sustainability - evaluating the effects of biobased production (preliminary title)
Process to produce bio-PDO (1,3-Propanediol)
Renewable Feedstocks for Fermentation (preliminary title)
Unit 2. Balances and Microbial Rates
Microorganisms and their function in nature
Functional understanding of nutrient requirements for microbial growth
Learning about the process: broth balances
Learning about the process: gas-phase balances
Learning about the microorganism: q-rates and chemostat
Learning about the process and organism: batch
Extra guest lecture: balances
Extra: banana skins
PDO case
Best practice: mixed cultures
Unit 3. The Black Box Model and Process Reaction
The process reaction
Basics of the black box model
Energy consuming and energy producing products
A PDO black box model: experiments for parameter identification
Black box models: The PDO process reaction as function of μ
PDO continuous process design: calculation of inputs and outputs using the process reaction
Aerobic PDO process: improving sustainability
Introduction to Metabolic Flux Analysis
Best practice: succinic acid
Unit 4. Fermentation Design
Introduction to fermentation technology
The large-scale fermenter
Fermenter operation
Gas transport
Heat transport
Mixing
Basic approach to design and then optimize a PDO fermentation process
Best practice: artemisinin
Unit 5. Scale-down and Scale-up
Introduction to scale-effects
Similarity and scaling approaches
Scaling Macro- Micro-balances
Dimensional scaling
Computational fluid dynamics for scaling
Industrial examples
Unit 6. Wrap-up
Closing lecture: Industrial Fermentation: where we are now, and where we will go?
Final assessment

Good to know

Know what's good
, what to watch for
, and possible dealbreakers
Provides foundational knowledge of industrial fermentation processes, making it suitable for beginners seeking an introduction to the field
The course is designed for individuals with a science or engineering background, ensuring relevance to their existing knowledge and skills
Taught by experienced course leaders with expertise in industrial fermentation, ensuring high-quality instruction and practical insights
Emphasizes the design and optimization of industrial fermentation processes, catering to those interested in developing these skills
Provides a comprehensive overview of the field, covering essential aspects such as feedstocks, products, and process design
Equips learners with the knowledge and tools to evaluate and improve industrial fermentation processes, addressing a practical industry need

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Activities

Coming soon We're preparing activities for Industrial Fermentation. These are activities you can do either before, during, or after a course.

Career center

Learners who complete Industrial Fermentation will develop knowledge and skills that may be useful to these careers:
Biotechnology Research Scientist
A Biotechnology Research Scientist conducts research to develop new and improved fermentation processes. This course would provide you with the knowledge and skills needed to be successful in this role. You would learn about the essential process inputs and outputs, how to design and optimize fermentation processes, and how to scale-up processes from the lab to the factory. This course would also help you to develop the problem-solving and critical thinking skills that are essential for success in this field.
Bioprocess Engineer
A Bioprocess Engineer designs, develops, and optimizes biological processes for the production of food, beverages, pharmaceuticals, and other products. This course would provide you with the knowledge and skills needed to be successful in this role. You would learn about the essential process inputs and outputs, how to design and optimize fermentation processes, and how to scale-up processes from the lab to the factory. This course would also help you to develop the problem-solving and critical thinking skills that are essential for success in this field.
Fermentation Scientist
A Fermentation Scientist is responsible for designing, developing, and optimizing industrial fermentation processes. Industrial fermentation is used to produce a variety of products, including food, beverages, pharmaceuticals, and fuels. This course would provide you with the knowledge and skills needed to be successful in this role. You would learn about the essential process inputs and outputs, how to design and optimize fermentation processes, and how to scale-up processes from the lab to the factory. This course would also help you to develop the problem-solving and critical thinking skills that are essential for success in this field.
Chemical Engineer
A Chemical Engineer designs, develops, and optimizes chemical processes for the production of a variety of products, including food, beverages, pharmaceuticals, and fuels. This course would provide you with the knowledge and skills needed to be successful in this role. You would learn about the essential process inputs and outputs, how to design and optimize fermentation processes, and how to scale-up processes from the lab to the factory. This course would also help you to develop the problem-solving and critical thinking skills that are essential for success in this field.
Environmental Engineer
An Environmental Engineer designs, develops, and optimizes processes to protect the environment. This course would provide you with the knowledge and skills needed to be successful in this role. You would learn about the essential process inputs and outputs, how to design and optimize fermentation processes, and how to scale-up processes from the lab to the factory. This course would also help you to develop the problem-solving and critical thinking skills that are essential for success in this field.
Microbiologist
A Microbiologist studies microorganisms, such as bacteria, fungi, and viruses. This course would provide you with the knowledge and skills needed to be successful in this role. You would learn about the essential process inputs and outputs, how to design and optimize fermentation processes, and how to scale-up processes from the lab to the factory. This course would also help you to develop the problem-solving and critical thinking skills that are essential for success in this field.
Food Scientist
A Food Scientist develops new and improved food products. This course would provide you with the knowledge and skills needed to be successful in this role. You would learn about the essential process inputs and outputs, how to design and optimize fermentation processes, and how to scale-up processes from the lab to the factory. This course would also help you to develop the problem-solving and critical thinking skills that are essential for success in this field.
Pharmaceutical Scientist
A Pharmaceutical Scientist develops new and improved pharmaceutical products. This course would provide you with the knowledge and skills needed to be successful in this role. You would learn about the essential process inputs and outputs, how to design and optimize fermentation processes, and how to scale-up processes from the lab to the factory. This course would also help you to develop the problem-solving and critical thinking skills that are essential for success in this field.
Quality Control Manager
A Quality Control Manager ensures that products meet quality standards. This course would provide you with the knowledge and skills needed to be successful in this role. You would learn about the essential process inputs and outputs, how to design and optimize fermentation processes, and how to scale-up processes from the lab to the factory. This course would also help you to develop the problem-solving and critical thinking skills that are essential for success in this field.
Sales Engineer
A Sales Engineer sells products and services to customers. This course would provide you with the knowledge and skills needed to be successful in this role. You would learn about the essential process inputs and outputs, how to design and optimize fermentation processes, and how to scale-up processes from the lab to the factory. This course would also help you to develop the problem-solving and critical thinking skills that are essential for success in this field.
Research and Development Manager
A Research and Development Manager leads research and development projects. This course would provide you with the knowledge and skills needed to be successful in this role. You would learn about the essential process inputs and outputs, how to design and optimize fermentation processes, and how to scale-up processes from the lab to the factory. This course would also help you to develop the problem-solving and critical thinking skills that are essential for success in this field.
Business Analyst
A Business Analyst analyzes business needs and develops solutions. This course would provide you with the knowledge and skills needed to be successful in this role. You would learn about the essential process inputs and outputs, how to design and optimize fermentation processes, and how to scale-up processes from the lab to the factory. This course would also help you to develop the problem-solving and critical thinking skills that are essential for success in this field.
Project Manager
A Project Manager plans, organizes, and executes projects. This course would provide you with the knowledge and skills needed to be successful in this role. You would learn about the essential process inputs and outputs, how to design and optimize fermentation processes, and how to scale-up processes from the lab to the factory. This course would also help you to develop the problem-solving and critical thinking skills that are essential for success in this field.
Technical Writer
A Technical Writer writes technical documentation, such as manuals, reports, and proposals. This course would provide you with the knowledge and skills needed to be successful in this role. You would learn about the essential process inputs and outputs, how to design and optimize fermentation processes, and how to scale-up processes from the lab to the factory. This course would also help you to develop the problem-solving and critical thinking skills that are essential for success in this field.
Consultant
A Consultant provides advice and guidance to organizations. This course would provide you with the knowledge and skills needed to be successful in this role. You would learn about the essential process inputs and outputs, how to design and optimize fermentation processes, and how to scale-up processes from the lab to the factory. This course would also help you to develop the problem-solving and critical thinking skills that are essential for success in this field.

Reading list

We've selected five books that we think will supplement your learning. Use these to develop background knowledge, enrich your coursework, and gain a deeper understanding of the topics covered in Industrial Fermentation.
Provides a comprehensive overview of bioprocess engineering principles, focusing on the areas of kinetics, transport phenomena, and scale-up.
Covers the principles and applications of metabolic engineering, which is essential for the design and optimization of industrial fermentation processes.
This textbook provides basic knowledge for biochemical engineers, covering concepts such as enzyme kinetics, fermentation kinetics, microbial growth, and the design of bioreactors and bioprocesses.
This textbook provides a comprehensive overview of bioprocess engineering principles, with a focus on industrial applications. It covers a wide range of topics, including bioreactor design, fermentation processes, and product recovery.
Focuses on the engineering principles of bioprocesses, including microbial metabolism, enzyme kinetics, transport phenomena, and bioreactor design.

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