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Welcome to our third course  "Learn Bulk RNA-Seq Data Analysis From Scratch," a comprehensive online course designed to equip you with the skills and knowledge needed to harness the power of RNA-Seq data analysis (NGS). In this course, we delve into the captivating world of genomics and bioinformatics, empowering you to explore the intricacies of gene expression and unravel the hidden mysteries within the transcriptome.

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Welcome to our third course  "Learn Bulk RNA-Seq Data Analysis From Scratch," a comprehensive online course designed to equip you with the skills and knowledge needed to harness the power of RNA-Seq data analysis (NGS). In this course, we delve into the captivating world of genomics and bioinformatics, empowering you to explore the intricacies of gene expression and unravel the hidden mysteries within the transcriptome.

With the advent of high-throughput sequencing technologies, RNA-Seq (NGS) has revolutionized the field of molecular biology, allowing us to decipher the intricate dance of gene expression in ways never before possible. This course serves as your gateway to understanding and interpreting the wealth of information contained within RNA-Seq data, transforming it into valuable insights and meaningful discoveries.

Bioinformatics, the multidisciplinary field at the intersection of biology and computer science, plays a pivotal role in deciphering complex biological systems. In this course, we emphasize the importance of bioinformatics methodologies and tools, which form the foundation of modern genomics research. By mastering these techniques, you will gain a competitive edge in the rapidly evolving field of life sciences.

Course Highlights:

  • Comprehensive Training: From raw FASTQ files to in-depth analysis, this course provides a step-by-step guide to RNA-Seq data analysis, covering the entire workflow with clarity and precision. This is not limited to RNA-Seq but to all type of NGS data.

  • Linux and R-Studio: Get hands-on experience with two essential tools in bioinformatics. Learn to navigate the Linux command line environment and utilize R-Studio for data processing, visualization, and statistical analysis.

  • Theory and Practice: We strike a perfect balance between theoretical concepts and practical application. Understand the underlying principles of RNA-Seq analysis while honing your skills through hands-on exercises and real-world examples.

  • Cutting-edge Techniques: Stay at the forefront of genomics research by exploring the latest advancements in RNA-Seq analysis techniques, such as differential gene expression analysis, functional enrichment analysis, and pathway analysis.

  • Expert Guidance: Benefit from the expertise of experienced instructors who have a deep understanding of both bioinformatics and molecular biology. Their guidance and insights will ensure a rewarding learning experience.

  • Interactive Learning: Engage in interactive assignments, and discussions to reinforce your understanding and interact with a vibrant community of fellow learners, fostering knowledge exchange.

Embark on this transformative journey into the world of RNA-Seq analysis and bioinformatics. Unleash the power of genomics to uncover hidden biological insights and make significant contributions to scientific research. Enroll in "Bioinformatics: Learn Bulk RNA-Seq Data Analysis From Scratch" today and equip yourself with the essential skills needed to excel in the dynamic field of bioinformatics. We assure you that all of the tools that will be used in this course will be Freely available and closely related to the course material. For most of them you do not need to sign up.

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Introduces hands-on experience with R-Studio and Linux, which are widely accepted tools in bioinformatics
Emphasizes theory and its application, which offers a balanced learning approach
Covers advanced techniques like differential, functional enrichment, and pathway analysis
Provides guidance from experienced instructors with expertise in bioinformatics
Encourages interactive learning through assignments, discussions, and community engagement

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Activities

Be better prepared before your course. Deepen your understanding during and after it. Supplement your coursework and achieve mastery of the topics covered in Bioinformatic; Learn Bulk RNA-Seq Data Analysis From Scratch with these activities:
Read 'Python Crash Course' by Eric Matthes
This book provides a comprehensive and beginner-friendly introduction to Python programming, covering essential concepts and practical applications.
Show steps
  • Read through the book
  • Complete the exercises and projects in the book
Learn about Python programming basics
Python is the primary programming language used in this course, so it is essential to have a strong foundation in the basics.
Show steps
  • Go through the Python tutorial on the official Python website
  • Complete a few beginner-level Python coding challenges on HackerRank or LeetCode
Create a Git repository to manage the project files
Using Git for version control will help you track changes to your code and collaborate with others on the project.
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  • Create a new Git repository
  • Add your project files to the repository
  • Commit your changes to the repository
Five other activities
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Complete coding exercises to practice implementing algorithms and data structures
Regular practice is crucial for improving your programming skills and solidifying your understanding of algorithms and data structures.
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  • Solve problems on platforms like HackerRank or LeetCode
  • Participate in coding competitions
Join a study group or online forum for Python learners
Engaging with peers can enhance your learning experience by providing opportunities for collaboration, discussion, and support.
Show steps
  • Join a study group or online forum
  • Participate in discussions and ask questions
Build a simple command-line application using Python
Applying your skills to a project will help you gain practical experience and reinforce your understanding of Python programming.
Show steps
  • Design and plan your project
  • Implement the core functionality of your project
  • Test and debug your project
Attend a local Python meetup or conference
Connecting with other Python enthusiasts and professionals can help you stay updated on the latest trends and best practices in the field.
Show steps
  • Find a local Python meetup or conference
  • Attend the event and engage with other attendees
Contribute to open-source Python projects
Contributing to open-source projects allows you to apply your skills in a real-world setting and make a positive impact on the Python community.
Show steps
  • Find open-source Python projects that align with your interests
  • Submit bug reports or feature requests
  • Make code contributions to the projects

Career center

Learners who complete Bioinformatic; Learn Bulk RNA-Seq Data Analysis From Scratch will develop knowledge and skills that may be useful to these careers:
Computational Biologist
Computational Biologists use computational tools to analyze large datasets, including RNA-Seq data. This course will provide you with the skills needed to analyze RNA-Seq data independently and contribute to research projects in computational biology.
Bioinformatics Scientist
Bioinformatics Scientists are responsible for the design, development, and interpretation of bioinformatics tools and databases, including those related to RNA-Seq analysis. This course provides a thorough grounding in RNA-Seq data analysis techniques, which would enable a Bioinformatics Scientist to pursue RNA-Seq projects from start to finish.
Data Scientist
Data Scientists use data analysis techniques to solve problems in various industries, including healthcare, finance, and marketing. This course will provide you with the skills needed to analyze RNA-Seq data using computational tools, which can be applied to other types of data as well.
Research Scientist - Bioinformatics
Research Scientists - Bioinformatics use bioinformatics tools and techniques to conduct research in various areas of biology, including genomics and transcriptomics. This course will provide you with the skills needed to conduct independent research projects involving RNA-Seq data analysis.
Biostatistician
Biostatisticians use statistical methods to analyze biological data, including RNA-Seq data. This course will provide you with the skills needed to analyze RNA-Seq data using statistical techniques, which can be applied to other types of biological data as well.
Genome Analyst
Genome Analysts are responsible for analyzing genomic data, including RNA-Seq data. This course will provide you with the skills needed to analyze RNA-Seq data independently and contribute to research projects in genomics.
Genomics Data Analyst
Genomics Data Analysts are responsible for analyzing genomics data, including RNA-Seq data. This course will provide you with the skills needed to analyze RNA-Seq data independently and contribute to research projects in genomics.
Biomedical Informatics Specialist
Biomedical Informatics Specialists use computer science and information technology to manage and analyze biomedical data, including RNA-Seq data. This course will provide you with the knowledge and skills needed to manage and analyze RNA-Seq data independently, helping you qualify for entry-level positions in this field.
Scientific Programmer
Scientific Programmers use programming skills to solve problems in various scientific fields, including bioinformatics. This course will provide you with the programming skills needed to analyze RNA-Seq data independently and contribute to research projects in bioinformatics.
Laboratory Technician
Laboratory Technicians conduct experiments and analyze data in a laboratory setting, including the analysis of RNA-Seq data. This course may be of interest to Laboratory Technicians who wish to expand their knowledge of RNA-Seq data analysis techniques.
Biomedical Engineer
Biomedical Engineers use engineering principles to solve problems in the medical field, including the analysis of RNA-Seq data. This course may be of interest to Biomedical Engineers who wish to expand their knowledge of RNA-Seq data analysis techniques.
Clinical Research Associate
Clinical Research Associates manage clinical trials, including the analysis of RNA-Seq data. This course may be of interest to Clinical Research Associates who wish to expand their knowledge of RNA-Seq data analysis techniques.
Patent Attorney
Patent Attorneys help inventors obtain patents for their inventions, including inventions related to RNA-Seq data analysis. This course may be of interest to Patent Attorneys who wish to expand their knowledge of RNA-Seq data analysis techniques in order to better understand the inventions they are working on.
Science Teacher
Science Teachers teach science to students at various levels, including the analysis of RNA-Seq data. This course may be of interest to Science Teachers who wish to expand their knowledge of RNA-Seq data analysis techniques in order to better teach this topic to their students.
Medical Writer
Medical Writers communicate complex medical information to a variety of audiences, including the general public. This course may be of interest to Medical Writers who wish to expand their knowledge of RNA-Seq data analysis techniques in order to better communicate this information to their audiences.

Reading list

We've selected six books that we think will supplement your learning. Use these to develop background knowledge, enrich your coursework, and gain a deeper understanding of the topics covered in Bioinformatic; Learn Bulk RNA-Seq Data Analysis From Scratch.
Adds depth to the course as it is an extensive and comprehensive guide to modern bioinformatics.
Provides a comprehensive overview of machine learning methods used in bioinformatics, covering topics such as supervised learning, unsupervised learning, and feature selection.
Provides a concise overview of essential bioinformatics topics, covering topics such as sequence analysis, gene expression analysis, and protein structure prediction.

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