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Signaling actions of small molecules

Seyun Kim

Our life is fine-controlled by various molecules in cells. Different types of molecules include macromolecules (e.g., protein, nucleic acid) and small molecules. In addition to classical views of central dogma, emerging roles of small molecules called metaboites have been recently proposed to significantly impact biological events. Metabolites are contiuously and dynamically produced by different metabolic pathways, thus playing key roles in energy metabolism as well as macromolecular biosynthesis/degradation. Accumulating evidence clearly suggests that certain types of metabolites exert signaling actions through interactions with macromolecules. Compared to other protein-protein and nucleic acid-protein interactions, metabolite-protein interactions appear significant in living cells, therby mediating specific actions in regulating target protein functions and activities.

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Our life is fine-controlled by various molecules in cells. Different types of molecules include macromolecules (e.g., protein, nucleic acid) and small molecules. In addition to classical views of central dogma, emerging roles of small molecules called metaboites have been recently proposed to significantly impact biological events. Metabolites are contiuously and dynamically produced by different metabolic pathways, thus playing key roles in energy metabolism as well as macromolecular biosynthesis/degradation. Accumulating evidence clearly suggests that certain types of metabolites exert signaling actions through interactions with macromolecules. Compared to other protein-protein and nucleic acid-protein interactions, metabolite-protein interactions appear significant in living cells, therby mediating specific actions in regulating target protein functions and activities.

This 6 week-course will give you a solid introduction to the basic fundamentals of metabolite-mediated cell signaling. I will first define the concept of metabolites and introduces major types of molceular interactions. Throughout 6 weeks, we will study biochemical basis of metabolite actions in cell signaling. In particular, we will study interesting examples of how endogenous small molecules intreact with target proteins and control their functions. These major topics will be explained in the context of human health and disease such as cancer and inflammtion. Everyone appreciates that cell signaling is essential for sustaining life. How can you explain the action of noxious gases like nitric oxide in controlling blood pressure? What can be the fundamental mode of energy metabolites in modulating gene expression? Have you ever thought about ways of how our gut microbiota can influence our body? By studying signaling actions of metabolites, we can better understand the complex but wonderful nature of our cellular signaling system, further identifying novel ways to manage major human disease.

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Syllabus

Week 1
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Week 3
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Week 4
Week 5
Week 6
Final exam

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Examines the intricate interplay between metabolites and target proteins, providing insights into their signaling actions in cellular processes
Taught by Seyun Kim, recognized for their expertise in metabolite-mediated cell signaling
Provides a solid introduction to the fundamental concepts of metabolite-mediated cell signaling
Explores the roles of metabolites in energy metabolism, macromolecular biosynthesis/degradation, and disease
Emphasizes the significance of metabolite-protein interactions in regulating target protein functions and activities
Suitable for those seeking an understanding of metabolite-mediated cell signaling in health and disease

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Career center

Learners who complete Signaling actions of small molecules will develop knowledge and skills that may be useful to these careers:
Bioinformatician
Bioinformaticians use computer systems and technology to research, interpret, and automate complex biological data. This course can help build a foundation in the biological processes and macromolecular interactions that are crucial for success in this role. By understanding the signaling actions of small molecules, you can apply that knowledge to the development of drugs and bioinformatics treatments.
Molecular Biologist
Molecular biologists study the structure and function of molecules, particularly DNA, RNA, and proteins. This course provides a solid introduction to the basic fundamentals of metabolite-mediated cell signaling, which would be helpful for a molecular biologist to understand the molecular interactions that occur in living systems.
Neuroscientist
Neuroscientists study the structure and function of the nervous system. This course covers the biochemical basis of metabolite actions in cell signaling, which would be helpful for a neuroscientist to understand the molecular interactions that occur in the nervous system.
Toxicologist
Toxicologists study the effects of toxic substances on living organisms. This course covers the biochemical basis of metabolite actions in cell signaling, which would be helpful for a toxicologist to understand the mechanisms of action of toxic substances.
Pharmacologist
Pharmacologists study the effects of drugs on living organisms. This course covers the biochemical basis of metabolite actions in cell signaling, which would be helpful for a pharmacologist to understand the mechanisms of action of drugs.
Biomedical Engineer
Biomedical engineers combine engineering principles with medical and biological science to design and create devices and systems to improve human health. This course covers the biochemical basis of metabolite actions in cell signaling, which can help biomedical engineers develop more effective treatments for diseases.
Physician
Physicians diagnose and treat diseases. This course covers the biochemical basis of metabolite actions in cell signaling, which would be helpful for a physician to understand the molecular mechanisms of disease.
Computational Biologist
Computational biologists use computational techniques to analyze large datasets of biological data. This course covers the basic fundamentals of metabolite-mediated cell signaling, which would be helpful for a computational biologist to understand the molecular interactions that occur in living systems.
Research Scientist
Research scientists conduct scientific research to advance knowledge in various fields. This course provides a solid introduction to the basic fundamentals of metabolite-mediated cell signaling, which would be helpful for a research scientist to understand the molecular interactions that occur in living systems.
Biophysicist
Biophysicists explore the physical principles of living systems and how they function at the molecular level. This course covers the basic fundamentals of metabolite-mediated cell signaling, which would be very helpful for a biophysicist to understand the molecular interactions that occur in living systems.
Data Scientist
Data scientists use scientific methods, processes, algorithms, and systems to extract knowledge and insights from data in various forms, both structured and unstructured. This course provides a solid introduction to the basic fundamentals of metabolite-mediated cell signaling, which would be helpful for a data scientist to understand the molecular interactions that occur in living systems and to develop new methods for analyzing biological data.
Chemical Engineer
Chemical engineers work in industries that produce chemicals, fuels, pharmaceuticals, food, and more. This course covers the biochemical basis of metabolite actions in cell signaling, which would be helpful for a chemical engineer to understand the processes that occur in living systems.
Physicist
Physicists study the laws of nature and the physical properties of matter and energy. This course covers the biochemical basis of metabolite actions in cell signaling, which would be helpful for a physicist to understand the molecular interactions that occur in living systems.
Science Writer
Science writers communicate complex scientific concepts to the public. This course covers the biochemical basis of metabolite actions in cell signaling, which would be helpful for a science writer to understand the molecular interactions that occur in living systems.
Nanotechnologist
Nanotechnologists work in industries that produce nanomaterials, devices, and systems. This course covers the biochemical basis of metabolite actions in cell signaling, which would be helpful for a nanotechnologist to understand the processes that occur in living systems.

Reading list

We've selected six books that we think will supplement your learning. Use these to develop background knowledge, enrich your coursework, and gain a deeper understanding of the topics covered in Signaling actions of small molecules.
Widely used as a college-level textbook, this book provides a comprehensive introduction to cell biology, including detailed chapters on metabolism, signal transduction, and gene expression.
Covers the fundamentals of biochemistry, including chapters on metabolism, signal transduction, and gene expression.
Provides a comprehensive overview of protein structure, with chapters on protein folding, protein interactions, and protein function.
Provides a comprehensive overview of immunology, with chapters on the immune system and its role in health and disease.

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