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Ravi Iyengar, PhD
and
Iman Tavassoly, MD, PhD
NOTE: In order to take this course you should have taken and complete the following courses in the Signature Track: Introduction to Systems Biology, Network Analysis in Systems Biology, Dynamical Modeling Methods for Systems Biology, Experimental Methods in SB and Integrated Analysis In Systems Biology
Register for this course and see more details by visiting:
OpenCourser.com/course/i0sscq/systems
Good to know
Good to know
Know what's good ,
what to watch for , and
possible dealbreakers
Prerequisite-heavy. Must take many other courses to qualify
Taught by top experts and professors
Provides foundational theories and models
Recommended for those seeking advanced knowledge and research expertise
Covers specialized topics in systems biology
Suitable for researchers and practitioners in the field
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Save Systems Biology and Biotechnology Capstone to your list so you can find it easily later:
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Reviews summary
Incredible course
Systems Biology and Biotechnology Capstone is a wonderful course with wonderful instructors. Students have appreciated the contents of the course and highly recommend it.
Wonderful instructors
"Wonderful course with wonderful instructors"
Activities
Be better prepared
before
your course. Deepen your understanding
during
and
after
it. Supplement your coursework and achieve mastery of the topics covered
in Systems Biology and Biotechnology Capstone with these
activities:
Review Network Analysis concepts
Show steps
Boost your recall of Network Analysis techniques and concepts to prepare for this course's focus on Systems Biology networks
Browse courses on
Network Analysis
Show steps
-
Review your lecture notes and slides from previous Network Analysis courses
-
Go over key chapters from the Network Analysis textbook
Explore Pathway Databases
Show steps
Familiarizes students with databases used for storing and analyzing biological pathways.
Show steps
-
Access and navigate pathway databases such as KEGG and Reactome.
-
Search for pathways of interest and explore their components and interactions.
-
Use the databases to identify potential drug targets and biomarkers.
Formulate research questions with peers
Show steps
Engage with your peers to develop research questions related to Systems Biology network analysis
Show steps
-
Connect with classmates online or in person
-
Share your ideas and interests in Systems Biology
-
Collaboratively brainstorm and refine research questions
Five other activities
Expand to see all activities and additional details
Show all eight activities
Run Jupyter notebooks
Show steps
Reinforce concepts and solidify understanding by working through practice problems using Jupyter notebooks.
Show steps
-
Download and install Jupyter notebooks
-
Open the provided notebooks and follow the instructions
-
Run the code and explore the results
Simulate a Cell Cycle
Show steps
Strengthens understanding of the stages and transitions of the cell cycle.
Browse courses on
Cell Cycle
Show steps
-
Use a computer simulation to model the cell cycle.
-
Manipulate variables such as temperature, pH, and nutrient availability to observe how they affect the cell cycle.
Explore advanced Systems Biology tools
Show steps
Enhance your understanding of Systems Biology techniques by working through advanced tutorials
Browse courses on
Systems Biology
Show steps
-
Identify relevant tutorials on topics like Cytoscape or Bioconductor
-
Follow the tutorials step-by-step to gain practical experience
-
Apply what you learn to analyze real-world Systems Biology datasets
Write a Summary of a Scientific Paper
Show steps
Develops critical reading, writing, and communication skills essential for scientific research.
Show steps
-
Choose a scientific paper related to the course topic.
-
Read and understand the paper thoroughly.
-
Summarize the key points of the paper, including the research question, methods, results, and conclusions.
Build a Model of Gene Regulation
Show steps
Provides hands-on experience in applying concepts of gene regulation and transcription.
Browse courses on
Gene Regulation
Show steps
-
Design a model of gene regulation, including the promoter, transcription factors, and RNA polymerase.
-
Simulate the model to predict the expression of a gene under different conditions.
-
Validate the model by comparing its predictions to experimental data.
Review Network Analysis concepts
Show steps
Boost your recall of Network Analysis techniques and concepts to prepare for this course's focus on Systems Biology networks
Browse courses on
Network Analysis
Show steps
Show steps
Show steps
- Review your lecture notes and slides from previous Network Analysis courses
- Go over key chapters from the Network Analysis textbook
Explore Pathway Databases
Show steps
Familiarizes students with databases used for storing and analyzing biological pathways.
Show steps
Show steps
Show steps
- Access and navigate pathway databases such as KEGG and Reactome.
- Search for pathways of interest and explore their components and interactions.
- Use the databases to identify potential drug targets and biomarkers.
Formulate research questions with peers
Show steps
Engage with your peers to develop research questions related to Systems Biology network analysis
Show steps
Show steps
Show steps
- Connect with classmates online or in person
- Share your ideas and interests in Systems Biology
- Collaboratively brainstorm and refine research questions
Five other activities
Expand to see all activities and additional details
Show all eight activities
Run Jupyter notebooks
Show steps
Reinforce concepts and solidify understanding by working through practice problems using Jupyter notebooks.
Show steps
Show steps
Show steps
- Download and install Jupyter notebooks
- Open the provided notebooks and follow the instructions
- Run the code and explore the results
Simulate a Cell Cycle
Show steps
Strengthens understanding of the stages and transitions of the cell cycle.
Browse courses on
Cell Cycle
Show steps
Show steps
Show steps
- Use a computer simulation to model the cell cycle.
- Manipulate variables such as temperature, pH, and nutrient availability to observe how they affect the cell cycle.
Explore advanced Systems Biology tools
Show steps
Enhance your understanding of Systems Biology techniques by working through advanced tutorials
Browse courses on
Systems Biology
Show steps
Show steps
Show steps
- Identify relevant tutorials on topics like Cytoscape or Bioconductor
- Follow the tutorials step-by-step to gain practical experience
- Apply what you learn to analyze real-world Systems Biology datasets
Write a Summary of a Scientific Paper
Show steps
Develops critical reading, writing, and communication skills essential for scientific research.
Show steps
Show steps
Show steps
- Choose a scientific paper related to the course topic.
- Read and understand the paper thoroughly.
- Summarize the key points of the paper, including the research question, methods, results, and conclusions.
Build a Model of Gene Regulation
Show steps
Provides hands-on experience in applying concepts of gene regulation and transcription.
Browse courses on
Gene Regulation
Show steps
Show steps
Show steps
- Design a model of gene regulation, including the promoter, transcription factors, and RNA polymerase.
- Simulate the model to predict the expression of a gene under different conditions.
- Validate the model by comparing its predictions to experimental data.
Career center
Learners who complete Systems Biology and Biotechnology Capstone will develop knowledge and skills
that may be useful to these careers:
Systems Biologist
Systems Biologist
Systems Biologists study complex biological systems by combining experimental techniques with computational modeling. The Systems Biology and Biotechnology Capstone course will aid you in developing the skills necessary to succeed in this role through its focus on network analysis, dynamical modeling methods, and experimental methods in SB.
Computational Biologist
Computational Biologist
In this role, you will use computer science, mathematics, and biology to develop models and simulations of biological systems. The Systems Biology and Biotechnology Capstone course will aid you in developing the skills necessary to succeed in this role through its focus on network analysis, dynamical modeling methods, and experimental methods in SB.
Bioinformatician
Bioinformatician
As a Bioinformatician, you will use computational tools and techniques to analyze large datasets of biological data to identify patterns and relationships. The Systems Biology and Biotechnology Capstone course will aid you in developing the skills necessary to succeed in this role through its focus on network analysis, dynamical modeling methods, and experimental methods in SB.
Biomedical Engineer
Biomedical Engineer
In this role, you will apply engineering principles to design and develop medical devices, diagnostics, and treatments. The Systems Biology and Biotechnology Capstone course may aid you in developing the skills necessary to succeed in this role through its focus on network analysis and dynamical modeling methods.
Pharmaceutical Scientist
Pharmaceutical Scientist
Pharmaceutical Scientists develop and test new drugs and therapies. The Systems Biology and Biotechnology Capstone course may aid you in developing the skills necessary to succeed in this role through its focus on network analysis and dynamical modeling methods.
Medical Researcher
Medical Researcher
Medical Researchers conduct research to understand the causes and treatments of diseases. The Systems Biology and Biotechnology Capstone course may aid you in developing the skills necessary to succeed in this role through its focus on network analysis and dynamical modeling methods.
Molecular Biologist
Molecular Biologist
Molecular Biologists study the structure and function of molecules. The Systems Biology and Biotechnology Capstone course may aid you in developing the skills necessary to succeed in this role through its focus on network analysis and dynamical modeling methods.
Toxicologist
Toxicologist
Toxicologists study the effects of chemicals on living organisms. The Systems Biology and Biotechnology Capstone course may aid you in developing the skills necessary to succeed in this role through its focus on network analysis and dynamical modeling methods.
Biomedical Scientist
Biomedical Scientist
As a Biomedical Scientist, you will conduct research to understand the causes and treatments of diseases. The Systems Biology and Biotechnology Capstone course may aid you in developing the skills necessary to succeed in this role through its focus on network analysis and dynamical modeling methods.
Industrial Biotechnologist
Industrial Biotechnologist
In this role, you will use biotechnology to develop and improve industrial processes. The Systems Biology and Biotechnology Capstone course may aid you in developing the skills necessary to succeed in this role through its focus on network analysis and dynamical modeling methods.
Data Scientist
Data Scientist
Data Scientists use data to solve problems and make decisions. The Systems Biology and Biotechnology Capstone course may aid you in developing the skills necessary to succeed in this role through its focus on network analysis and dynamical modeling methods.
Biotechnology Scientist
Biotechnology Scientist
In this role, you will use biotechnology techniques to develop new products and processes for a variety of industries. The Systems Biology and Biotechnology Capstone course may aid you in developing the skills necessary to succeed in this role through its focus on network analysis and dynamical modeling methods.
Wildlife Biologist
Wildlife Biologist
Wildlife Biologists study the behavior and ecology of animals. The Systems Biology and Biotechnology Capstone course may aid you in developing the skills necessary to succeed in this role through its focus on network analysis and dynamical modeling methods.
Medical Doctor
Medical Doctor
As a Medical Doctor, you will diagnose and treat diseases. The Systems Biology and Biotechnology Capstone course may aid you in developing the skills necessary to succeed in this role through its focus on network analysis and dynamical modeling methods.
Veterinarian
Veterinarian
Veterinarians diagnose and treat diseases in animals. The Systems Biology and Biotechnology Capstone course may aid you in developing the skills necessary to succeed in this role through its focus on network analysis and dynamical modeling methods.
For more career information including salaries, visit:
OpenCourser.com/course/i0sscq/systems
Reading list
We've selected nine books
that we think will supplement your
learning. Use these to
develop background knowledge, enrich your coursework, and gain a
deeper understanding of the topics covered in
Systems Biology and Biotechnology Capstone.
This textbook provides a comprehensive overview of experimental methods and data analysis techniques commonly used in systems biology research, and will help students to develop a more comprehensive understanding of the field.
Save
This textbook provides a comprehensive overview of the field of systems biology, covering topics such as network analysis, dynamical modeling, and experimental methods.
This introductory textbook provides a comprehensive overview of the field of systems biology, and will provide students with important background knowledge for the topics covered in this course.
Save
This textbook is another great resource for students seeking an introduction to the field of systems biology, and will provide additional context for the topics covered in this course.
This textbook provides a comprehensive overview of the field of bioprocess engineering, covering topics such as reactor design, process control, and product recovery.
This textbook provides a comprehensive overview of the field of bioinformatics, covering topics such as sequence analysis, gene expression analysis, and protein structure prediction.
This textbook provides a comprehensive overview of the field of molecular biology, covering topics such as DNA replication, transcription, and translation.
Save
This textbook provides a comprehensive overview of the field of biochemistry, covering topics such as enzyme catalysis, metabolism, and molecular biology.
This textbook provides a comprehensive overview of the field of human biology, covering topics such as anatomy, physiology, and genetics.
For more information about how these books relate to this course, visit:
OpenCourser.com/course/i0sscq/systems
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Time
12 hours
Via
Coursera
Institution
Icahn School of Medicine at Mount Sinai
Instructors
Ravi Iyengar, PhD
Iman Tavassoly, MD, PhD
This course belongs to a
collection
called
Systems Biology and Biotechnology. It's comprised of six courses:
- Experimental Methods in Systems Biology
- Introduction to Systems Biology
- Network Analysis in Systems Biology
- Integrated Analysis in Systems Biology
- Dynamical Modeling Methods for Systems Biology
- Systems Biology and Biotechnology Capstone (viewing)
Good to know
Prerequisite-heavy. Must take many other courses to qualify
Taught by top experts and professors
Provides foundational theories and models
Recommended for those seeking advanced knowledge and research expertise
Covers specialized topics in systems biology
Suitable for researchers and practitioners in the field
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