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Lars Pilgaard Mikkelsen,
Vedrana Andersen Dahl,
Henning Osholm Soerensen,
Jakob Sauer Jørgensen,
and
Jens Wenzel Andreasen
In this course you get the chance to get teaching and hands-on experience with the complete workflow of high-resolution tomography analysis. You will get introduced to data acquisition, 3D reconstruction, segmentation and meshing and, finally, 3D modelling of data to extract physical parameters describing mechanical and flow properties. The teaching and the exercises will take place in close interaction with top experts in the field. Exercises will require some basic programming skills, and will be carried out in a common python environment.
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OpenCourser.com/course/nnkv9o/introduction
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What's inside
Syllabus
Introduction to Advanced Tomography
This modules introduces the course and the philosophy behind its structure
What is tomography and what can it do for me?
Read more
Syllabus
Introduction to Advanced Tomography
This modules introduces the course and the philosophy behind its structure
What is tomography and what can it do for me?
Read more
Introduction to Jupyter notebooks for data handling
Where is the data coming from?
Description of the cases studied throughout the course
Tomographic reconstruction
Imaging contrast
Segmentation
Computer resources
Modelling physical parameters
Closing session
Short presentation of the instructors and in the Honors part work with other cases
Good to know
Good to know
Know what's good ,
what to watch for , and
possible dealbreakers
Teaches advanced tomographic techniques, providing learners a comprehensive understanding of the field
Combines theory with practical exercises, providing hands-on experience in data acquisition, reconstruction, segmentation, and modeling
Led by top experts in the field, ensuring high-quality instruction and guidance throughout
Requires basic programming skills, catering to learners with some prior coding experience
Focuses on high-resolution tomography analysis, limiting its applicability to specific areas of research and industry
Incorporates Jupyter notebooks for data handling, necessitating familiarity with this tool
Save this course
Save Introduction to advanced tomography to your list so you can find it easily later:
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Reviews summary
Advanced tomography fundamentals
Learners say this course offers a strong theoretical basis for advanced tomography with engaging assignments and a strong introduction to the field. They say the course is well-structured and the materials are well-organized. The honors track is said to be a highlight. While one learner says the course lacks complete examples, most learners say the course is taught clearly, the instructors are knowledgeable, and the assignments are rigorous.
Knowledgeable instructors
"Excellent!"
"Very complete course..."
"The best course"
Well-structured course
"Excellent!"
"The best course"
"muy bueno, practico y entendible"
Clear instruction
"Lectures are informative..."
"The mathematical background can help you if you want to go deeper in tomography."
"The FEniCS part of the last week should be given more time, since it is extremely detailed and also relevant."
Rigorous assessments
"Awesome course. Very useful in my field of research."
"I love the modules that covered regularization by total variation."
"Eventhough this course is hard, I love it."
Strong foundation
"Excellent basics on tomography and research oriented course."
"The framework of theoretical aspects and jupyter notebooks helped me a lot to understand and to create my own pipeline."
"Very complete course, it explained the workflow with high precision and good examples."
Limited practical examples
"Not a complete course."
"Lectures are informative but practical examples are limited."
Activities
Be better prepared
before
your course. Deepen your understanding
during
and
after
it. Supplement your coursework and achieve mastery of the topics covered
in Introduction to advanced tomography with these
activities:
Review fundamental concepts in mathematics and physics
Show steps
Strengthen your foundation by reviewing essential mathematical and physical concepts that will be utilized throughout the course, ensuring a smoother learning journey.
Browse courses on
Mathematics
Show steps
-
Revisit textbooks or online resources covering relevant mathematical and physical concepts
-
Solve practice problems and exercises to test your understanding
-
Attend review sessions or workshops offered by your institution or online platforms
Organize and summarize course materials
Show steps
Enhance your learning experience by organizing and summarizing course materials, such as notes, slides, and assignments, into a cohesive and easily accessible format.
Show steps
-
Create a system for organizing your notes and materials
-
Regularly summarize key concepts, definitions, and formulas
-
Maintain a record of important questions, insights, and areas where you need further clarification
Practice data acquisition and handling
Show steps
Get hands-on experience in data handling techniques, preparing you for the upcoming coursework in data acquisition and analysis.
Browse courses on
Data Acquisition
Show steps
-
Set up your Jupyter notebook environment
-
Practice loading and visualizing 3D tomography data
-
Experiment with different data acquisition parameters
Four other activities
Expand to see all activities and additional details
Show all seven activities
Participate in group discussions on advanced tomography techniques
Show steps
Engage in discussions with fellow learners to exchange knowledge, share experiences, and gain diverse perspectives on advanced tomography techniques, enriching your comprehension of the subject.
Browse courses on
Tomography
Show steps
-
Join or create a study group or online forum dedicated to tomography
-
Actively participate in discussions, asking questions, sharing insights, and providing support
-
Collaborate on mini-projects or case studies related to tomography
Explore segmentation and meshing techniques
Show steps
Enhance your understanding of 3D reconstruction techniques by following guided tutorials on segmentation and meshing, which are critical steps in preparing data for physical parameter modeling.
Browse courses on
Segmentation
Show steps
-
Find and access high-quality tutorials on segmentation and meshing
-
Follow the tutorials step-by-step and practice the techniques on sample data
-
Experiment with different segmentation and meshing parameters
Develop a 3D model for a specific application
Show steps
Apply your knowledge of 3D reconstruction and modeling to create a practical 3D model for a specific application, allowing you to experience the entire workflow firsthand.
Browse courses on
3D Modeling
Show steps
-
Identify a specific application or problem that could benefit from a 3D model
-
Plan and design the 3D model, considering its purpose and requirements
-
Use the skills and techniques learned in the course to create the 3D model
-
Evaluate and refine the 3D model based on its performance and feedback
Contribute to open-source projects related to tomography
Show steps
Engage with the broader tomography community by contributing to open-source projects, allowing you to apply your skills while making a tangible impact in the field.
Browse courses on
Open Source
Show steps
-
Identify open-source projects related to tomography that align with your interests and skills
-
Review the project documentation and contribute to discussions to understand the project's goals and needs
-
Collaborate with other contributors to fix bugs, implement new features, or improve documentation
-
Attend online or in-person events related to the project to connect with other contributors and learn about the latest developments
Review fundamental concepts in mathematics and physics
Show steps
Strengthen your foundation by reviewing essential mathematical and physical concepts that will be utilized throughout the course, ensuring a smoother learning journey.
Browse courses on
Mathematics
Show steps
Show steps
Show steps
- Revisit textbooks or online resources covering relevant mathematical and physical concepts
- Solve practice problems and exercises to test your understanding
- Attend review sessions or workshops offered by your institution or online platforms
Organize and summarize course materials
Show steps
Enhance your learning experience by organizing and summarizing course materials, such as notes, slides, and assignments, into a cohesive and easily accessible format.
Show steps
Show steps
Show steps
- Create a system for organizing your notes and materials
- Regularly summarize key concepts, definitions, and formulas
- Maintain a record of important questions, insights, and areas where you need further clarification
Practice data acquisition and handling
Show steps
Get hands-on experience in data handling techniques, preparing you for the upcoming coursework in data acquisition and analysis.
Browse courses on
Data Acquisition
Show steps
Show steps
Show steps
- Set up your Jupyter notebook environment
- Practice loading and visualizing 3D tomography data
- Experiment with different data acquisition parameters
Four other activities
Expand to see all activities and additional details
Show all seven activities
Participate in group discussions on advanced tomography techniques
Show steps
Engage in discussions with fellow learners to exchange knowledge, share experiences, and gain diverse perspectives on advanced tomography techniques, enriching your comprehension of the subject.
Browse courses on
Tomography
Show steps
Show steps
Show steps
- Join or create a study group or online forum dedicated to tomography
- Actively participate in discussions, asking questions, sharing insights, and providing support
- Collaborate on mini-projects or case studies related to tomography
Explore segmentation and meshing techniques
Show steps
Enhance your understanding of 3D reconstruction techniques by following guided tutorials on segmentation and meshing, which are critical steps in preparing data for physical parameter modeling.
Browse courses on
Segmentation
Show steps
Show steps
Show steps
- Find and access high-quality tutorials on segmentation and meshing
- Follow the tutorials step-by-step and practice the techniques on sample data
- Experiment with different segmentation and meshing parameters
Develop a 3D model for a specific application
Show steps
Apply your knowledge of 3D reconstruction and modeling to create a practical 3D model for a specific application, allowing you to experience the entire workflow firsthand.
Browse courses on
3D Modeling
Show steps
Show steps
Show steps
- Identify a specific application or problem that could benefit from a 3D model
- Plan and design the 3D model, considering its purpose and requirements
- Use the skills and techniques learned in the course to create the 3D model
- Evaluate and refine the 3D model based on its performance and feedback
Contribute to open-source projects related to tomography
Show steps
Engage with the broader tomography community by contributing to open-source projects, allowing you to apply your skills while making a tangible impact in the field.
Browse courses on
Open Source
Show steps
Show steps
Show steps
- Identify open-source projects related to tomography that align with your interests and skills
- Review the project documentation and contribute to discussions to understand the project's goals and needs
- Collaborate with other contributors to fix bugs, implement new features, or improve documentation
- Attend online or in-person events related to the project to connect with other contributors and learn about the latest developments
Career center
Learners who complete Introduction to advanced tomography will develop knowledge and skills
that may be useful to these careers:
Microscopist
Microscopist
Microscopists are responsible for operating and maintaining microscopes to prepare, examine, and analyze biological or inorganic materials. They use advanced imaging techniques, such as tomography, to create detailed images of samples. This course provides a comprehensive overview of tomography, from data acquisition to 3D modeling, which will be highly beneficial for those who wish to pursue a career as a Microscopist.
Materials Scientist
Materials Scientist
Materials Scientists research and develop new materials, as well as improve existing ones. They use advanced techniques, such as tomography, to study the structure and properties of materials. This course provides a foundation in tomography, which will be helpful for those who wish to pursue a career as a Materials Scientist.
Biomedical Engineer
Biomedical Engineer
Biomedical Engineers design and develop medical devices and systems. They use advanced imaging techniques, such as tomography, to create detailed images of the human body. This course provides a strong foundation in tomography, which will be helpful for those who wish to pursue a career as a Biomedical Engineer.
Mechanical Engineer
Mechanical Engineer
Mechanical Engineers design and develop mechanical systems. They use advanced imaging techniques, such as tomography, to analyze the structure and properties of materials. This course provides a foundation in tomography, which will be helpful for those who wish to pursue a career as a Mechanical Engineer.
Civil Engineer
Civil Engineer
Civil Engineers design and construct infrastructure projects. They use advanced imaging techniques, such as tomography, to analyze the structure and properties of materials. This course provides a foundation in tomography, which will be helpful for those who wish to pursue a career as a Civil Engineer.
Geologist
Geologist
Geologists study the Earth's structure and history. They use advanced imaging techniques, such as tomography, to create detailed images of the Earth's interior. This course provides a foundation in tomography, which will be helpful for those who wish to pursue a career as a Geologist.
Archaeologist
Archaeologist
Archaeologists study human history and culture through the excavation and analysis of artifacts. They use advanced imaging techniques, such as tomography, to create detailed images of archaeological sites. This course provides a foundation in tomography, which will be helpful for those who wish to pursue a career as an Archaeologist.
Forensic Scientist
Forensic Scientist
Forensic Scientists collect and analyze evidence to solve crimes. They use advanced imaging techniques, such as tomography, to create detailed images of crime scenes and evidence. This course provides a foundation in tomography, which will be helpful for those who wish to pursue a career as a Forensic Scientist.
Quality Control Inspector
Quality Control Inspector
Quality Control Inspectors ensure that products meet safety and quality standards. They use advanced imaging techniques, such as tomography, to inspect products for defects. This course provides a foundation in tomography, which will be helpful for those who wish to pursue a career as a Quality Control Inspector.
Manufacturing Engineer
Manufacturing Engineer
Manufacturing Engineers design and develop manufacturing processes. They use advanced imaging techniques, such as tomography, to analyze the structure and properties of materials. This course provides a foundation in tomography, which will be helpful for those who wish to pursue a career as a Manufacturing Engineer.
Research Scientist
Research Scientist
Research Scientists conduct research in a variety of fields. They use advanced imaging techniques, such as tomography, to create detailed images of samples. This course provides a foundation in tomography, which will be helpful for those who wish to pursue a career as a Research Scientist.
Science Teacher
Science Teacher
Science Teachers teach science to students at all levels. They use advanced imaging techniques, such as tomography, to demonstrate scientific concepts. This course provides a foundation in tomography, which will be helpful for those who wish to pursue a career as a Science Teacher.
Technical Writer
Technical Writer
Technical Writers create technical documentation, such as manuals and reports. They use advanced imaging techniques, such as tomography, to create detailed illustrations. This course provides a foundation in tomography, which will be helpful for those who wish to pursue a career as a Technical Writer.
Science Communicator
Science Communicator
Science Communicators share scientific information with the public. They use advanced imaging techniques, such as tomography, to create engaging visuals. This course provides a foundation in tomography, which will be helpful for those who wish to pursue a career as a Science Communicator.
Medical Physicist
Medical Physicist
Medical Physicists use physics principles to develop and use medical imaging technologies, such as tomography. They use advanced imaging techniques, such as tomography, to create detailed images of the human body.
For more career information including salaries, visit:
OpenCourser.com/course/nnkv9o/introduction
Reading list
We've selected ten books
that we think will supplement your
learning. Use these to
develop background knowledge, enrich your coursework, and gain a
deeper understanding of the topics covered in
Introduction to advanced tomography.
Provides comprehensive coverage of medical image analysis, including chapters on different tomographic imaging modalities and their applications in clinical practice.
Provides a comprehensive overview of image processing techniques used in radiology, including chapters on different tomographic imaging modalities and their applications.
Provides a comprehensive overview of deep learning techniques used in computer vision, including chapters on image classification and object detection.
Provides a comprehensive overview of digital image processing techniques, including chapters on different image acquisition and processing methods used in tomography.
Save
Provides a comprehensive overview of artificial intelligence techniques used in computer vision, including chapters on image classification and object detection.
Provides a comprehensive overview of computer vision, including chapters on image acquisition and processing methods used in tomography.
Provides a comprehensive overview of image processing and analysis, including chapters on different image acquisition and processing methods used in tomography.
Provides a comprehensive overview of digital image processing, including chapters on different image acquisition and processing methods used in tomography.
Save
Provides a comprehensive overview of machine learning techniques used in computer vision, including chapters on image classification and object detection.
Save
Provides a concise overview of image processing techniques, including chapters on different image acquisition and processing methods used in tomography.
For more information about how these books relate to this course, visit:
OpenCourser.com/course/nnkv9o/introduction
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Via
Coursera
Institution
Technical University of Denmark (DTU)
Instructors
Lars Pilgaard Mikkelsen
Vedrana Andersen Dahl
Henning Osholm Soerensen
Jakob Sauer Jørgensen
Jens Wenzel Andreasen
Language
English
Transcripts
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Good to know
Teaches advanced tomographic techniques, providing learners a comprehensive understanding of the field
Combines theory with practical exercises, providing hands-on experience in data acquisition, reconstruction, segmentation, and modeling
Led by top experts in the field, ensuring high-quality instruction and guidance throughout
Requires basic programming skills, catering to learners with some prior coding experience
Focuses on high-resolution tomography analysis, limiting its applicability to specific areas of research and industry
Incorporates Jupyter notebooks for data handling, necessitating familiarity with this tool
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